mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-d2n983om because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:52:47,658 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:52:48,660 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:52:48,856 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:53:05,835 - cnv_pipe.batch.run_model - INFO - Loaded data with 65 samples
2026-06-03 04:53:06,060 - cnv_pipe.batch.run_model - INFO - Processing cluster 873 with 188 probes
2026-06-03 04:53:06,468 - cnv_pipe.batch.run_model.cluster873 - INFO - Child process started for cluster 873 with 188 probes
2026-06-03 04:56:18,775 - cnv_pipe.batch.run_model.cluster873 - INFO - Child process finished cluster 873. Wrote cluster_873_samples.csv and cluster_873_params.csv
2026-06-03 04:56:18,777 - cnv_pipe.batch.run_model - INFO - Cluster 873 finished in 192.72 seconds. Status: SUCCESS