mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-nz751d73 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:53:14,550 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:53:15,634 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:53:15,834 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:53:35,245 - cnv_pipe.batch.run_model - INFO - Loaded data with 65 samples
2026-06-03 04:53:35,585 - cnv_pipe.batch.run_model - INFO - Processing cluster 1019 with 112 probes
2026-06-03 04:53:36,124 - cnv_pipe.batch.run_model.cluster1019 - INFO - Child process started for cluster 1019 with 112 probes
2026-06-03 04:55:40,855 - cnv_pipe.batch.run_model.cluster1019 - INFO - Child process finished cluster 1019. Wrote cluster_1019_samples.csv and cluster_1019_params.csv
2026-06-03 04:55:40,857 - cnv_pipe.batch.run_model - INFO - Cluster 1019 finished in 125.27 seconds. Status: SUCCESS