mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-8xd185d6 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:50:25,729 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:50:26,514 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:50:26,679 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:50:41,496 - cnv_pipe.batch.run_model - INFO - Loaded data with 65 samples
2026-06-03 04:50:41,697 - cnv_pipe.batch.run_model - INFO - Processing cluster 83 with 161 probes
2026-06-03 04:50:42,095 - cnv_pipe.batch.run_model.cluster83 - INFO - Child process started for cluster 83 with 161 probes
2026-06-03 04:53:27,676 - cnv_pipe.batch.run_model.cluster83 - INFO - Child process finished cluster 83. Wrote cluster_83_samples.csv and cluster_83_params.csv
2026-06-03 04:53:27,679 - cnv_pipe.batch.run_model - INFO - Cluster 83 finished in 165.98 seconds. Status: SUCCESS