File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/85/dbb77a84d8fa6728b7fe543ebb09ab/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-g0cinj4n because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:52:53,729 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:52:54,712 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:52:54,899 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:53:11,754 - cnv_pipe.batch.run_model - INFO - Loaded data with 65 samples
2026-06-03 04:53:12,091 - cnv_pipe.batch.run_model - INFO - Processing cluster 913 with 200 probes
2026-06-03 04:53:12,585 - cnv_pipe.batch.run_model.cluster913 - INFO - Child process started for cluster 913 with 200 probes
2026-06-03 04:56:53,202 - cnv_pipe.batch.run_model.cluster913 - INFO - Child process finished cluster 913. Wrote cluster_913_samples.csv and cluster_913_params.csv
2026-06-03 04:56:53,205 - cnv_pipe.batch.run_model - INFO - Cluster 913 finished in 221.11 seconds. Status: SUCCESS