mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-h08lq5cp because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:52:29,124 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:52:29,945 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:52:30,116 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:52:45,697 - cnv_pipe.batch.run_model - INFO - Loaded data with 65 samples
2026-06-03 04:52:45,785 - cnv_pipe.batch.run_model - INFO - Processing cluster 774 with 182 probes
2026-06-03 04:52:46,219 - cnv_pipe.batch.run_model.cluster774 - INFO - Child process started for cluster 774 with 182 probes
2026-06-03 04:55:59,682 - cnv_pipe.batch.run_model.cluster774 - INFO - Child process finished cluster 774. Wrote cluster_774_samples.csv and cluster_774_params.csv
2026-06-03 04:55:59,685 - cnv_pipe.batch.run_model - INFO - Cluster 774 finished in 193.90 seconds. Status: SUCCESS