mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-3tvc8ms3 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:52:37,226 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:52:38,083 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:52:38,262 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:52:53,937 - cnv_pipe.batch.run_model - INFO - Loaded data with 65 samples
2026-06-03 04:52:54,161 - cnv_pipe.batch.run_model - INFO - Processing cluster 820 with 199 probes
2026-06-03 04:52:54,566 - cnv_pipe.batch.run_model.cluster820 - INFO - Child process started for cluster 820 with 199 probes
2026-06-03 04:56:21,999 - cnv_pipe.batch.run_model.cluster820 - INFO - Child process finished cluster 820. Wrote cluster_820_samples.csv and cluster_820_params.csv
2026-06-03 04:56:22,001 - cnv_pipe.batch.run_model - INFO - Cluster 820 finished in 207.84 seconds. Status: SUCCESS