mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-pi6xcd2i because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:52:52,667 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:52:53,651 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:52:53,857 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:53:10,416 - cnv_pipe.batch.run_model - INFO - Loaded data with 65 samples
2026-06-03 04:53:10,505 - cnv_pipe.batch.run_model - INFO - Processing cluster 899 with 108 probes
2026-06-03 04:53:10,920 - cnv_pipe.batch.run_model.cluster899 - INFO - Child process started for cluster 899 with 108 probes
2026-06-03 04:55:13,937 - cnv_pipe.batch.run_model.cluster899 - INFO - Child process finished cluster 899. Wrote cluster_899_samples.csv and cluster_899_params.csv
2026-06-03 04:55:13,938 - cnv_pipe.batch.run_model - INFO - Cluster 899 finished in 123.43 seconds. Status: SUCCESS