mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-1qwp10ju because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:50:11,382 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:50:12,273 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:50:12,453 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:50:28,749 - cnv_pipe.batch.run_model - INFO - Loaded data with 65 samples
2026-06-03 04:50:28,991 - cnv_pipe.batch.run_model - INFO - Processing cluster 1 with 185 probes
2026-06-03 04:50:29,420 - cnv_pipe.batch.run_model.cluster1 - INFO - Child process started for cluster 1 with 185 probes
2026-06-03 04:53:41,906 - cnv_pipe.batch.run_model.cluster1 - INFO - Child process finished cluster 1. Wrote cluster_1_samples.csv and cluster_1_params.csv
2026-06-03 04:53:41,915 - cnv_pipe.batch.run_model - INFO - Cluster 1 finished in 192.92 seconds. Status: SUCCESS