mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-k81h_uya because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:52:43,544 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:52:44,459 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:52:44,644 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:53:00,379 - cnv_pipe.batch.run_model - INFO - Loaded data with 65 samples
2026-06-03 04:53:00,585 - cnv_pipe.batch.run_model - INFO - Processing cluster 850 with 199 probes
2026-06-03 04:53:00,964 - cnv_pipe.batch.run_model.cluster850 - INFO - Child process started for cluster 850 with 199 probes
2026-06-03 04:56:24,693 - cnv_pipe.batch.run_model.cluster850 - INFO - Child process finished cluster 850. Wrote cluster_850_samples.csv and cluster_850_params.csv
2026-06-03 04:56:24,696 - cnv_pipe.batch.run_model - INFO - Cluster 850 finished in 204.11 seconds. Status: SUCCESS