File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/89/9f728537c6a3ddd6d5f75bdaff5a7d/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-fgyw5h9m because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:54:10,121 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:54:11,110 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:54:11,317 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:54:29,037 - cnv_pipe.batch.run_model - INFO - Loaded data with 65 samples
2026-06-03 04:54:29,313 - cnv_pipe.batch.run_model - INFO - Processing cluster 1310 with 192 probes
2026-06-03 04:54:29,758 - cnv_pipe.batch.run_model.cluster1310 - INFO - Child process started for cluster 1310 with 192 probes
2026-06-03 04:58:03,181 - cnv_pipe.batch.run_model.cluster1310 - INFO - Child process finished cluster 1310. Wrote cluster_1310_samples.csv and cluster_1310_params.csv
2026-06-03 04:58:03,184 - cnv_pipe.batch.run_model - INFO - Cluster 1310 finished in 213.87 seconds. Status: SUCCESS