mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-c94kk3yu because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:53:12,332 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:53:13,200 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:53:13,378 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:53:29,504 - cnv_pipe.batch.run_model - INFO - Loaded data with 65 samples
2026-06-03 04:53:29,734 - cnv_pipe.batch.run_model - INFO - Processing cluster 1021 with 168 probes
2026-06-03 04:53:30,165 - cnv_pipe.batch.run_model.cluster1021 - INFO - Child process started for cluster 1021 with 168 probes
2026-06-03 04:56:36,357 - cnv_pipe.batch.run_model.cluster1021 - INFO - Child process finished cluster 1021. Wrote cluster_1021_samples.csv and cluster_1021_params.csv
2026-06-03 04:56:36,359 - cnv_pipe.batch.run_model - INFO - Cluster 1021 finished in 186.62 seconds. Status: SUCCESS