mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-n_jg421c because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:27:38,567 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:27:39,396 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:27:39,566 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:28:22,637 - cnv_pipe.batch.run_model - INFO - Loaded data with 185 samples
2026-06-03 05:28:22,751 - cnv_pipe.batch.run_model - INFO - Processing cluster 485 with 197 probes
2026-06-03 05:28:23,282 - cnv_pipe.batch.run_model.cluster485 - INFO - Child process started for cluster 485 with 197 probes
2026-06-03 05:33:45,993 - cnv_pipe.batch.run_model.cluster485 - INFO - Child process finished cluster 485. Wrote cluster_485_samples.csv and cluster_485_params.csv
2026-06-03 05:33:45,995 - cnv_pipe.batch.run_model - INFO - Cluster 485 finished in 323.24 seconds. Status: SUCCESS