mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-h1qh0iw7 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:29:35,135 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:29:36,029 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:29:36,221 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:30:22,695 - cnv_pipe.batch.run_model - INFO - Loaded data with 185 samples
2026-06-03 05:30:22,981 - cnv_pipe.batch.run_model - INFO - Processing cluster 1001 with 186 probes
2026-06-03 05:30:23,445 - cnv_pipe.batch.run_model.cluster1001 - INFO - Child process started for cluster 1001 with 186 probes
2026-06-03 05:35:43,684 - cnv_pipe.batch.run_model.cluster1001 - INFO - Child process finished cluster 1001. Wrote cluster_1001_samples.csv and cluster_1001_params.csv
2026-06-03 05:35:43,689 - cnv_pipe.batch.run_model - INFO - Cluster 1001 finished in 320.71 seconds. Status: SUCCESS