mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-ulvdueal because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:29:28,433 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:29:29,427 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:29:29,625 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:30:16,198 - cnv_pipe.batch.run_model - INFO - Loaded data with 185 samples
2026-06-03 05:30:16,323 - cnv_pipe.batch.run_model - INFO - Processing cluster 968 with 147 probes
2026-06-03 05:30:16,976 - cnv_pipe.batch.run_model.cluster968 - INFO - Child process started for cluster 968 with 147 probes
2026-06-03 05:35:00,850 - cnv_pipe.batch.run_model.cluster968 - INFO - Child process finished cluster 968. Wrote cluster_968_samples.csv and cluster_968_params.csv
2026-06-03 05:35:00,852 - cnv_pipe.batch.run_model - INFO - Cluster 968 finished in 284.53 seconds. Status: SUCCESS