File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/93/2fbd4bcb1172a503334a349220d959/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-_wyd9uki because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:29:18,079 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:29:18,943 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:29:19,123 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:30:06,200 - cnv_pipe.batch.run_model - INFO - Loaded data with 185 samples
2026-06-03 05:30:06,307 - cnv_pipe.batch.run_model - INFO - Processing cluster 922 with 68 probes
2026-06-03 05:30:06,810 - cnv_pipe.batch.run_model.cluster922 - INFO - Child process started for cluster 922 with 68 probes
2026-06-03 05:32:32,790 - cnv_pipe.batch.run_model.cluster922 - INFO - Child process finished cluster 922. Wrote cluster_922_samples.csv and cluster_922_params.csv
2026-06-03 05:32:32,791 - cnv_pipe.batch.run_model - INFO - Cluster 922 finished in 146.48 seconds. Status: SUCCESS