mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-gcaondau because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:27:44,456 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:27:45,308 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:27:45,480 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:28:27,303 - cnv_pipe.batch.run_model - INFO - Loaded data with 185 samples
2026-06-03 05:28:27,510 - cnv_pipe.batch.run_model - INFO - Processing cluster 515 with 198 probes
2026-06-03 05:28:27,889 - cnv_pipe.batch.run_model.cluster515 - INFO - Child process started for cluster 515 with 198 probes
2026-06-03 05:34:10,688 - cnv_pipe.batch.run_model.cluster515 - INFO - Child process finished cluster 515. Wrote cluster_515_samples.csv and cluster_515_params.csv
2026-06-03 05:34:10,698 - cnv_pipe.batch.run_model - INFO - Cluster 515 finished in 343.19 seconds. Status: SUCCESS