File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/05/e4dc12f2537b86397a741ee6aff9a0/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-asae4ia3 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:25:53,454 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:25:54,257 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:25:54,423 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:26:35,067 - cnv_pipe.batch.run_model - INFO - Loaded data with 185 samples
2026-06-03 05:26:35,152 - cnv_pipe.batch.run_model - INFO - Processing cluster 103 with 191 probes
2026-06-03 05:26:35,635 - cnv_pipe.batch.run_model.cluster103 - INFO - Child process started for cluster 103 with 191 probes
2026-06-03 05:31:27,672 - cnv_pipe.batch.run_model.cluster103 - INFO - Child process finished cluster 103. Wrote cluster_103_samples.csv and cluster_103_params.csv
2026-06-03 05:31:27,675 - cnv_pipe.batch.run_model - INFO - Cluster 103 finished in 292.52 seconds. Status: SUCCESS