File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b6/e3754f1d96045a4c36b59360ff9262/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-0lliw734 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:29:14,687 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:29:15,554 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:29:15,734 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:30:04,000 - cnv_pipe.batch.run_model - INFO - Loaded data with 185 samples
2026-06-03 05:30:04,278 - cnv_pipe.batch.run_model - INFO - Processing cluster 911 with 192 probes
2026-06-03 05:30:04,711 - cnv_pipe.batch.run_model.cluster911 - INFO - Child process started for cluster 911 with 192 probes
2026-06-03 05:35:28,756 - cnv_pipe.batch.run_model.cluster911 - INFO - Child process finished cluster 911. Wrote cluster_911_samples.csv and cluster_911_params.csv
2026-06-03 05:35:28,760 - cnv_pipe.batch.run_model - INFO - Cluster 911 finished in 324.48 seconds. Status: SUCCESS