mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-if29aj03 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:29:42,615 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:29:43,612 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:29:43,800 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:30:29,874 - cnv_pipe.batch.run_model - INFO - Loaded data with 185 samples
2026-06-03 05:30:30,125 - cnv_pipe.batch.run_model - INFO - Processing cluster 1028 with 148 probes
2026-06-03 05:30:30,571 - cnv_pipe.batch.run_model.cluster1028 - INFO - Child process started for cluster 1028 with 148 probes
2026-06-03 05:34:58,471 - cnv_pipe.batch.run_model.cluster1028 - INFO - Child process finished cluster 1028. Wrote cluster_1028_samples.csv and cluster_1028_params.csv
2026-06-03 05:34:58,474 - cnv_pipe.batch.run_model - INFO - Cluster 1028 finished in 268.35 seconds. Status: SUCCESS