mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-_9qgb28z because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:27:52,091 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:27:52,915 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:27:53,082 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:28:36,915 - cnv_pipe.batch.run_model - INFO - Loaded data with 185 samples
2026-06-03 05:28:37,015 - cnv_pipe.batch.run_model - INFO - Processing cluster 539 with 191 probes
2026-06-03 05:28:37,586 - cnv_pipe.batch.run_model.cluster539 - INFO - Child process started for cluster 539 with 191 probes
2026-06-03 05:33:46,947 - cnv_pipe.batch.run_model.cluster539 - INFO - Child process finished cluster 539. Wrote cluster_539_samples.csv and cluster_539_params.csv
2026-06-03 05:33:46,951 - cnv_pipe.batch.run_model - INFO - Cluster 539 finished in 309.94 seconds. Status: SUCCESS