mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-qpbb2vyd because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:29:38,012 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:29:38,973 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:29:39,157 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:30:25,885 - cnv_pipe.batch.run_model - INFO - Loaded data with 185 samples
2026-06-03 05:30:26,156 - cnv_pipe.batch.run_model - INFO - Processing cluster 1009 with 191 probes
2026-06-03 05:30:26,567 - cnv_pipe.batch.run_model.cluster1009 - INFO - Child process started for cluster 1009 with 191 probes
2026-06-03 05:36:19,532 - cnv_pipe.batch.run_model.cluster1009 - INFO - Child process finished cluster 1009. Wrote cluster_1009_samples.csv and cluster_1009_params.csv
2026-06-03 05:36:19,536 - cnv_pipe.batch.run_model - INFO - Cluster 1009 finished in 353.38 seconds. Status: SUCCESS