mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-qhqkwjxm because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:29:38,202 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:29:39,194 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:29:39,384 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:30:27,041 - cnv_pipe.batch.run_model - INFO - Loaded data with 185 samples
2026-06-03 05:30:27,297 - cnv_pipe.batch.run_model - INFO - Processing cluster 1008 with 178 probes
2026-06-03 05:30:27,749 - cnv_pipe.batch.run_model.cluster1008 - INFO - Child process started for cluster 1008 with 178 probes
2026-06-03 05:35:46,850 - cnv_pipe.batch.run_model.cluster1008 - INFO - Child process finished cluster 1008. Wrote cluster_1008_samples.csv and cluster_1008_params.csv
2026-06-03 05:35:46,853 - cnv_pipe.batch.run_model - INFO - Cluster 1008 finished in 319.56 seconds. Status: SUCCESS