File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/45/1c5d4f98e5ef0ae69d95183da2a20c/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-f3vosa_0 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:27:27,956 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:27:28,826 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:27:28,991 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:28:10,452 - cnv_pipe.batch.run_model - INFO - Loaded data with 185 samples
2026-06-03 05:28:10,665 - cnv_pipe.batch.run_model - INFO - Processing cluster 433 with 181 probes
2026-06-03 05:28:11,081 - cnv_pipe.batch.run_model.cluster433 - INFO - Child process started for cluster 433 with 181 probes
2026-06-03 05:32:55,834 - cnv_pipe.batch.run_model.cluster433 - INFO - Child process finished cluster 433. Wrote cluster_433_samples.csv and cluster_433_params.csv
2026-06-03 05:32:55,836 - cnv_pipe.batch.run_model - INFO - Cluster 433 finished in 285.17 seconds. Status: SUCCESS