mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-2p2_6_w1 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:29:16,026 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:29:16,951 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:29:17,129 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:30:03,542 - cnv_pipe.batch.run_model - INFO - Loaded data with 185 samples
2026-06-03 05:30:03,651 - cnv_pipe.batch.run_model - INFO - Processing cluster 912 with 170 probes
2026-06-03 05:30:04,240 - cnv_pipe.batch.run_model.cluster912 - INFO - Child process started for cluster 912 with 170 probes
2026-06-03 05:35:01,157 - cnv_pipe.batch.run_model.cluster912 - INFO - Child process finished cluster 912. Wrote cluster_912_samples.csv and cluster_912_params.csv
2026-06-03 05:35:01,160 - cnv_pipe.batch.run_model - INFO - Cluster 912 finished in 297.51 seconds. Status: SUCCESS