File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c4/0c0d2f6cfba75fb63a3f2492940066/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-mejwl6y9 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:28:10,721 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:28:11,577 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:28:11,748 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:28:57,484 - cnv_pipe.batch.run_model - INFO - Loaded data with 185 samples
2026-06-03 05:28:57,694 - cnv_pipe.batch.run_model - INFO - Processing cluster 621 with 199 probes
2026-06-03 05:28:58,088 - cnv_pipe.batch.run_model.cluster621 - INFO - Child process started for cluster 621 with 199 probes
2026-06-03 05:34:40,991 - cnv_pipe.batch.run_model.cluster621 - INFO - Child process finished cluster 621. Wrote cluster_621_samples.csv and cluster_621_params.csv
2026-06-03 05:34:40,994 - cnv_pipe.batch.run_model - INFO - Cluster 621 finished in 343.30 seconds. Status: SUCCESS