mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-l9ti7zcr because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:28:21,189 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:28:22,059 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:28:22,242 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:29:05,314 - cnv_pipe.batch.run_model - INFO - Loaded data with 185 samples
2026-06-03 05:29:05,552 - cnv_pipe.batch.run_model - INFO - Processing cluster 674 with 189 probes
2026-06-03 05:29:05,946 - cnv_pipe.batch.run_model.cluster674 - INFO - Child process started for cluster 674 with 189 probes
2026-06-03 05:34:30,368 - cnv_pipe.batch.run_model.cluster674 - INFO - Child process finished cluster 674. Wrote cluster_674_samples.csv and cluster_674_params.csv
2026-06-03 05:34:30,372 - cnv_pipe.batch.run_model - INFO - Cluster 674 finished in 324.82 seconds. Status: SUCCESS