mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-yxbthj35 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:28:13,927 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:28:14,778 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:28:14,950 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:28:57,566 - cnv_pipe.batch.run_model - INFO - Loaded data with 185 samples
2026-06-03 05:28:57,661 - cnv_pipe.batch.run_model - INFO - Processing cluster 639 with 153 probes
2026-06-03 05:28:58,197 - cnv_pipe.batch.run_model.cluster639 - INFO - Child process started for cluster 639 with 153 probes
2026-06-03 05:33:16,622 - cnv_pipe.batch.run_model.cluster639 - INFO - Child process finished cluster 639. Wrote cluster_639_samples.csv and cluster_639_params.csv
2026-06-03 05:33:16,624 - cnv_pipe.batch.run_model - INFO - Cluster 639 finished in 258.96 seconds. Status: SUCCESS