mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-b38eguyl because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:27:51,533 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:27:52,311 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:27:52,476 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:28:34,486 - cnv_pipe.batch.run_model - INFO - Loaded data with 185 samples
2026-06-03 05:28:34,724 - cnv_pipe.batch.run_model - INFO - Processing cluster 537 with 144 probes
2026-06-03 05:28:35,119 - cnv_pipe.batch.run_model.cluster537 - INFO - Child process started for cluster 537 with 144 probes
2026-06-03 05:32:31,203 - cnv_pipe.batch.run_model.cluster537 - INFO - Child process finished cluster 537. Wrote cluster_537_samples.csv and cluster_537_params.csv
2026-06-03 05:32:31,206 - cnv_pipe.batch.run_model - INFO - Cluster 537 finished in 236.48 seconds. Status: SUCCESS