mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-jt96s1go because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:27:36,692 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:27:37,506 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:27:37,671 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:28:21,500 - cnv_pipe.batch.run_model - INFO - Loaded data with 185 samples
2026-06-03 05:28:21,718 - cnv_pipe.batch.run_model - INFO - Processing cluster 477 with 195 probes
2026-06-03 05:28:22,096 - cnv_pipe.batch.run_model.cluster477 - INFO - Child process started for cluster 477 with 195 probes
2026-06-03 05:33:40,101 - cnv_pipe.batch.run_model.cluster477 - INFO - Child process finished cluster 477. Wrote cluster_477_samples.csv and cluster_477_params.csv
2026-06-03 05:33:40,104 - cnv_pipe.batch.run_model - INFO - Cluster 477 finished in 318.39 seconds. Status: SUCCESS