mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-sr3rlur3 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:27:36,636 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:27:37,427 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:27:37,596 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:28:17,986 - cnv_pipe.batch.run_model - INFO - Loaded data with 185 samples
2026-06-03 05:28:18,070 - cnv_pipe.batch.run_model - INFO - Processing cluster 468 with 182 probes
2026-06-03 05:28:18,439 - cnv_pipe.batch.run_model.cluster468 - INFO - Child process started for cluster 468 with 182 probes
2026-06-03 05:33:21,327 - cnv_pipe.batch.run_model.cluster468 - INFO - Child process finished cluster 468. Wrote cluster_468_samples.csv and cluster_468_params.csv
2026-06-03 05:33:21,330 - cnv_pipe.batch.run_model - INFO - Cluster 468 finished in 303.26 seconds. Status: SUCCESS