mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-yib4frm1 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:27:35,498 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:27:36,406 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:27:36,576 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:28:17,530 - cnv_pipe.batch.run_model - INFO - Loaded data with 185 samples
2026-06-03 05:28:17,741 - cnv_pipe.batch.run_model - INFO - Processing cluster 467 with 167 probes
2026-06-03 05:28:18,115 - cnv_pipe.batch.run_model.cluster467 - INFO - Child process started for cluster 467 with 167 probes
2026-06-03 05:32:51,392 - cnv_pipe.batch.run_model.cluster467 - INFO - Child process finished cluster 467. Wrote cluster_467_samples.csv and cluster_467_params.csv
2026-06-03 05:32:51,395 - cnv_pipe.batch.run_model - INFO - Cluster 467 finished in 273.65 seconds. Status: SUCCESS