mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-jc23h97t because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:28:14,897 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:28:15,743 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:28:15,913 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:29:01,888 - cnv_pipe.batch.run_model - INFO - Loaded data with 185 samples
2026-06-03 05:29:02,132 - cnv_pipe.batch.run_model - INFO - Processing cluster 646 with 189 probes
2026-06-03 05:29:02,552 - cnv_pipe.batch.run_model.cluster646 - INFO - Child process started for cluster 646 with 189 probes
2026-06-03 05:34:19,466 - cnv_pipe.batch.run_model.cluster646 - INFO - Child process finished cluster 646. Wrote cluster_646_samples.csv and cluster_646_params.csv
2026-06-03 05:34:19,471 - cnv_pipe.batch.run_model - INFO - Cluster 646 finished in 317.34 seconds. Status: SUCCESS