mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-9k6bs6w9 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:29:56,525 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:29:57,421 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:29:57,609 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:30:44,913 - cnv_pipe.batch.run_model - INFO - Loaded data with 185 samples
2026-06-03 05:30:45,019 - cnv_pipe.batch.run_model - INFO - Processing cluster 1091 with 188 probes
2026-06-03 05:30:45,656 - cnv_pipe.batch.run_model.cluster1091 - INFO - Child process started for cluster 1091 with 188 probes
2026-06-03 05:36:32,367 - cnv_pipe.batch.run_model.cluster1091 - INFO - Child process finished cluster 1091. Wrote cluster_1091_samples.csv and cluster_1091_params.csv
2026-06-03 05:36:32,370 - cnv_pipe.batch.run_model - INFO - Cluster 1091 finished in 347.35 seconds. Status: SUCCESS