mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-mhin3bk7 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:27:52,793 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:27:53,625 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:27:53,794 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:28:37,271 - cnv_pipe.batch.run_model - INFO - Loaded data with 185 samples
2026-06-03 05:28:37,483 - cnv_pipe.batch.run_model - INFO - Processing cluster 541 with 177 probes
2026-06-03 05:28:37,870 - cnv_pipe.batch.run_model.cluster541 - INFO - Child process started for cluster 541 with 177 probes
2026-06-03 05:33:31,581 - cnv_pipe.batch.run_model.cluster541 - INFO - Child process finished cluster 541. Wrote cluster_541_samples.csv and cluster_541_params.csv
2026-06-03 05:33:31,584 - cnv_pipe.batch.run_model - INFO - Cluster 541 finished in 294.10 seconds. Status: SUCCESS