mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-kn10pcfx because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:27:44,185 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:27:45,110 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:27:45,279 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:28:28,695 - cnv_pipe.batch.run_model - INFO - Loaded data with 185 samples
2026-06-03 05:28:28,793 - cnv_pipe.batch.run_model - INFO - Processing cluster 509 with 194 probes
2026-06-03 05:28:29,313 - cnv_pipe.batch.run_model.cluster509 - INFO - Child process started for cluster 509 with 194 probes
2026-06-03 05:33:40,767 - cnv_pipe.batch.run_model.cluster509 - INFO - Child process finished cluster 509. Wrote cluster_509_samples.csv and cluster_509_params.csv
2026-06-03 05:33:40,770 - cnv_pipe.batch.run_model - INFO - Cluster 509 finished in 311.98 seconds. Status: SUCCESS