mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-k0fr8ju3 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:29:21,177 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:29:22,109 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:29:22,294 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:30:06,702 - cnv_pipe.batch.run_model - INFO - Loaded data with 185 samples
2026-06-03 05:30:06,928 - cnv_pipe.batch.run_model - INFO - Processing cluster 940 with 200 probes
2026-06-03 05:30:07,350 - cnv_pipe.batch.run_model.cluster940 - INFO - Child process started for cluster 940 with 200 probes
2026-06-03 05:35:43,807 - cnv_pipe.batch.run_model.cluster940 - INFO - Child process finished cluster 940. Wrote cluster_940_samples.csv and cluster_940_params.csv
2026-06-03 05:35:43,810 - cnv_pipe.batch.run_model - INFO - Cluster 940 finished in 336.88 seconds. Status: SUCCESS