mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-s3i_mkry because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:28:40,942 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:28:41,815 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:28:41,990 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:29:26,608 - cnv_pipe.batch.run_model - INFO - Loaded data with 185 samples
2026-06-03 05:29:26,705 - cnv_pipe.batch.run_model - INFO - Processing cluster 759 with 143 probes
2026-06-03 05:29:27,162 - cnv_pipe.batch.run_model.cluster759 - INFO - Child process started for cluster 759 with 143 probes
2026-06-03 05:33:40,270 - cnv_pipe.batch.run_model.cluster759 - INFO - Child process finished cluster 759. Wrote cluster_759_samples.csv and cluster_759_params.csv
2026-06-03 05:33:40,273 - cnv_pipe.batch.run_model - INFO - Cluster 759 finished in 253.57 seconds. Status: SUCCESS