mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-3ftzsg85 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:29:31,714 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:29:32,695 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:29:32,874 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:30:21,656 - cnv_pipe.batch.run_model - INFO - Loaded data with 185 samples
2026-06-03 05:30:21,915 - cnv_pipe.batch.run_model - INFO - Processing cluster 988 with 172 probes
2026-06-03 05:30:22,337 - cnv_pipe.batch.run_model.cluster988 - INFO - Child process started for cluster 988 with 172 probes
2026-06-03 05:35:27,375 - cnv_pipe.batch.run_model.cluster988 - INFO - Child process finished cluster 988. Wrote cluster_988_samples.csv and cluster_988_params.csv
2026-06-03 05:35:27,378 - cnv_pipe.batch.run_model - INFO - Cluster 988 finished in 305.46 seconds. Status: SUCCESS