File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d5/b6cfacf5190c1476f5e07decf6a69e/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-cvq1u24t because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:28:54,034 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:28:54,891 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:28:55,066 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:29:41,952 - cnv_pipe.batch.run_model - INFO - Loaded data with 185 samples
2026-06-03 05:29:42,061 - cnv_pipe.batch.run_model - INFO - Processing cluster 813 with 184 probes
2026-06-03 05:29:42,504 - cnv_pipe.batch.run_model.cluster813 - INFO - Child process started for cluster 813 with 184 probes
2026-06-03 05:34:55,007 - cnv_pipe.batch.run_model.cluster813 - INFO - Child process finished cluster 813. Wrote cluster_813_samples.csv and cluster_813_params.csv
2026-06-03 05:34:55,009 - cnv_pipe.batch.run_model - INFO - Cluster 813 finished in 312.95 seconds. Status: SUCCESS