File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d9/b06d113d88bb738a1d20e08eae70c9/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-64hhuo3p because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:30:20,979 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:30:21,976 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:30:22,202 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:31:10,832 - cnv_pipe.batch.run_model - INFO - Loaded data with 185 samples
2026-06-03 05:31:11,127 - cnv_pipe.batch.run_model - INFO - Processing cluster 1206 with 112 probes
2026-06-03 05:31:11,586 - cnv_pipe.batch.run_model.cluster1206 - INFO - Child process started for cluster 1206 with 112 probes
2026-06-03 05:34:51,875 - cnv_pipe.batch.run_model.cluster1206 - INFO - Child process finished cluster 1206. Wrote cluster_1206_samples.csv and cluster_1206_params.csv
2026-06-03 05:34:51,877 - cnv_pipe.batch.run_model - INFO - Cluster 1206 finished in 220.75 seconds. Status: SUCCESS