File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a1/27b2e02229e22cc1eacde68812ed90/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-e8ncdm1h because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:28:53,406 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:28:54,269 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:28:54,440 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:29:40,467 - cnv_pipe.batch.run_model - INFO - Loaded data with 185 samples
2026-06-03 05:29:40,724 - cnv_pipe.batch.run_model - INFO - Processing cluster 807 with 167 probes
2026-06-03 05:29:41,123 - cnv_pipe.batch.run_model.cluster807 - INFO - Child process started for cluster 807 with 167 probes
2026-06-03 05:34:42,432 - cnv_pipe.batch.run_model.cluster807 - INFO - Child process finished cluster 807. Wrote cluster_807_samples.csv and cluster_807_params.csv
2026-06-03 05:34:42,435 - cnv_pipe.batch.run_model - INFO - Cluster 807 finished in 301.71 seconds. Status: SUCCESS