mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-2qxd8sm5 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:36:49,348 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:36:50,166 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:36:50,342 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:37:34,975 - cnv_pipe.batch.run_model - INFO - Loaded data with 186 samples
2026-06-03 05:37:35,230 - cnv_pipe.batch.run_model - INFO - Processing cluster 971 with 188 probes
2026-06-03 05:37:35,647 - cnv_pipe.batch.run_model.cluster971 - INFO - Child process started for cluster 971 with 188 probes
2026-06-03 05:43:14,428 - cnv_pipe.batch.run_model.cluster971 - INFO - Child process finished cluster 971. Wrote cluster_971_samples.csv and cluster_971_params.csv
2026-06-03 05:43:14,431 - cnv_pipe.batch.run_model - INFO - Cluster 971 finished in 339.20 seconds. Status: SUCCESS