mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-ltsqncfo because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:36:47,438 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:36:48,225 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:36:48,391 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:37:32,968 - cnv_pipe.batch.run_model - INFO - Loaded data with 186 samples
2026-06-03 05:37:33,090 - cnv_pipe.batch.run_model - INFO - Processing cluster 972 with 173 probes
2026-06-03 05:37:33,675 - cnv_pipe.batch.run_model.cluster972 - INFO - Child process started for cluster 972 with 173 probes
2026-06-03 05:43:00,326 - cnv_pipe.batch.run_model.cluster972 - INFO - Child process finished cluster 972. Wrote cluster_972_samples.csv and cluster_972_params.csv
2026-06-03 05:43:00,329 - cnv_pipe.batch.run_model - INFO - Cluster 972 finished in 327.24 seconds. Status: SUCCESS