mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-7bnbnzog because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:34:53,804 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:34:54,601 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:34:54,771 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:35:44,393 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:35:44,664 - cnv_pipe.batch.run_model - INFO - Processing cluster 660 with 138 probes
2026-06-03 05:35:45,083 - cnv_pipe.batch.run_model.cluster660 - INFO - Child process started for cluster 660 with 138 probes
2026-06-03 05:40:21,486 - cnv_pipe.batch.run_model.cluster660 - INFO - Child process finished cluster 660. Wrote cluster_660_samples.csv and cluster_660_params.csv
2026-06-03 05:40:21,490 - cnv_pipe.batch.run_model - INFO - Cluster 660 finished in 276.83 seconds. Status: SUCCESS