mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-r5557fbq because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:35:48,311 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:35:49,415 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:35:49,620 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:36:46,300 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:36:46,703 - cnv_pipe.batch.run_model - INFO - Processing cluster 992 with 187 probes
2026-06-03 05:36:47,261 - cnv_pipe.batch.run_model.cluster992 - INFO - Child process started for cluster 992 with 187 probes
2026-06-03 05:42:35,360 - cnv_pipe.batch.run_model.cluster992 - INFO - Child process finished cluster 992. Wrote cluster_992_samples.csv and cluster_992_params.csv
2026-06-03 05:42:35,364 - cnv_pipe.batch.run_model - INFO - Cluster 992 finished in 348.66 seconds. Status: SUCCESS