File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/73/d3b985ccf7200fc9c54370eb1bc9b7/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-eh5s0qwj because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:34:28,877 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:34:29,930 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:34:30,132 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:35:25,539 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:35:25,935 - cnv_pipe.batch.run_model - INFO - Processing cluster 834 with 190 probes
2026-06-03 05:35:26,446 - cnv_pipe.batch.run_model.cluster834 - INFO - Child process started for cluster 834 with 190 probes
2026-06-03 05:41:36,143 - cnv_pipe.batch.run_model.cluster834 - INFO - Child process finished cluster 834. Wrote cluster_834_samples.csv and cluster_834_params.csv
2026-06-03 05:41:36,145 - cnv_pipe.batch.run_model - INFO - Cluster 834 finished in 370.21 seconds. Status: SUCCESS