mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-9l1eomyu because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:34:52,545 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:34:53,364 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:34:53,542 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:35:37,927 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:35:38,026 - cnv_pipe.batch.run_model - INFO - Processing cluster 655 with 177 probes
2026-06-03 05:35:38,586 - cnv_pipe.batch.run_model.cluster655 - INFO - Child process started for cluster 655 with 177 probes
2026-06-03 05:41:09,577 - cnv_pipe.batch.run_model.cluster655 - INFO - Child process finished cluster 655. Wrote cluster_655_samples.csv and cluster_655_params.csv
2026-06-03 05:41:09,581 - cnv_pipe.batch.run_model - INFO - Cluster 655 finished in 331.55 seconds. Status: SUCCESS