mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-02miq9ax because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:34:50,381 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:34:51,198 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:34:51,371 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:35:39,176 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:35:39,420 - cnv_pipe.batch.run_model - INFO - Processing cluster 883 with 193 probes
2026-06-03 05:35:39,801 - cnv_pipe.batch.run_model.cluster883 - INFO - Child process started for cluster 883 with 193 probes
2026-06-03 05:41:35,477 - cnv_pipe.batch.run_model.cluster883 - INFO - Child process finished cluster 883. Wrote cluster_883_samples.csv and cluster_883_params.csv
2026-06-03 05:41:35,481 - cnv_pipe.batch.run_model - INFO - Cluster 883 finished in 356.06 seconds. Status: SUCCESS