mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-swdjrpyx because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:35:11,336 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:35:12,134 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:35:12,307 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:36:01,689 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:36:01,942 - cnv_pipe.batch.run_model - INFO - Processing cluster 784 with 200 probes
2026-06-03 05:36:02,355 - cnv_pipe.batch.run_model.cluster784 - INFO - Child process started for cluster 784 with 200 probes
2026-06-03 05:42:10,513 - cnv_pipe.batch.run_model.cluster784 - INFO - Child process finished cluster 784. Wrote cluster_784_samples.csv and cluster_784_params.csv
2026-06-03 05:42:10,516 - cnv_pipe.batch.run_model - INFO - Cluster 784 finished in 368.57 seconds. Status: SUCCESS