mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-5d3id5el because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:34:53,835 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:34:54,923 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:34:55,148 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:35:50,322 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:35:50,629 - cnv_pipe.batch.run_model - INFO - Processing cluster 917 with 181 probes
2026-06-03 05:35:51,182 - cnv_pipe.batch.run_model.cluster917 - INFO - Child process started for cluster 917 with 181 probes
2026-06-03 05:41:18,282 - cnv_pipe.batch.run_model.cluster917 - INFO - Child process finished cluster 917. Wrote cluster_917_samples.csv and cluster_917_params.csv
2026-06-03 05:41:18,284 - cnv_pipe.batch.run_model - INFO - Cluster 917 finished in 327.66 seconds. Status: SUCCESS